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  5. Cpa|evm.model.tig00020943.22

Cpa|evm.model.tig00020943.22 (tig00020943_g16264.t1)


Aliases : tig00020943_g16264.t1

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020943.22
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cz10g28200.t1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
EOD04076 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
EOD07947 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
EOD18251 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
OT_04G04210.1 No alias Zinc finger, RING-type; E3 ubiquitin-protein ligase... 0.01 OrthoFinder
PTI_14G02520.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro2009_g310720.1 Contig340.g4632 Protein ligase Arkadia 0.01 OrthoFinder
Sro40_g024590.1 Contig335.g4466 RING finger domain protein 0.01 OrthoFinder
Sro524_g159890.1 Contig202.g2386 Receptor homology region, transmembrane domain- and RING... 0.02 OrthoFinder
Sro872_g213930.1 Contig2262.g18775 Zinc ion binding 0.01 OrthoFinder
SymbC1.scaffold1315.2 1315.2 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold510.4 510.4 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold75.16 75.16 Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
TP03G04320.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
TP05G03820.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
TP22G02510.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56851 56851 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Transcript_contig_57423 57423 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
XM_002505075.1 MICPUN_62302, 62302 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon;... 0.02 OrthoFinder
XM_003055570.1 MicpuC2_38033, 38033 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000750.1_cds_GFH14648.1_9125 HaLaN_10746, GFH14648 RING-type domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001468.1_cds_GFH19468.1_13945 HaLaN_16418, GFH19468 RING-type domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496531.1_260 KAA8496531 E3 ubiquitin-protein ligase RLIM 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496988.1_717 KAA8496988 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492975.1_2711 KAA8492975 E3 ubiquitin protein ligase RIE1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008190 eukaryotic initiation factor 4E binding IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 174 216
No external refs found!