Description : Protein of unknown function DUF393 [Interproscan].
Gene families : OG_01_0001596 (OrthoFinder) Phylogenetic Tree(s): OG0001596_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD11568 | |
Cluster | HCCA: Cluster_256 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000823.29 | tig00000823_g4555.t1 | DCC family protein At1g52590, chloroplastic... | 0.04 | OrthoFinder | |
Sro1151_g246770.1 | Contig4710.g35028 | DCC family protein At1g52590 | 0.02 | OrthoFinder | |
lcl|VRMN01000005.1_cds_KAA8493975.1_3839 | KAA8493975 | DCC family protein | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
BP | GO:0006284 | base-excision repair | IEP | Enrichment |
BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007263 | DCC1-like | 57 | 169 |
No external refs found! |