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  5. EOD11568

EOD11568


Description : Protein of unknown function DUF393 [Interproscan].


Gene families : OG_01_0001596 (OrthoFinder) Phylogenetic Tree(s): OG0001596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD11568
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000823.29 tig00000823_g4555.t1 DCC family protein At1g52590, chloroplastic... 0.04 OrthoFinder
Sro1151_g246770.1 Contig4710.g35028 DCC family protein At1g52590 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8493975.1_3839 KAA8493975 DCC family protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007263 DCC1-like 57 169
No external refs found!