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  5. EOD11176

EOD11176


Description : LSM domain, eukaryotic/archaea-type [Interproscan].


Gene families : OG_01_0003870 (OrthoFinder) Phylogenetic Tree(s): OG0003870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD11176
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Cz03g18050.t1 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
EOD19599 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 5 69
No external refs found!