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  5. EOD10877

EOD10877


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0003330 (OrthoFinder) Phylogenetic Tree(s): OG0003330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD10877
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Cre03.g205800 30787098 No description available 0.05 OrthoFinder
PTI_12G03680.1 No alias WD40 repeat [Interproscan]. 0.05 OrthoFinder
Sro154_g069920.1 Contig2716.g21870 P21-activated protein kinase-interacting protein 1-like 0.04 OrthoFinder
TP05G03650.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002503888.1 MICPUN_60045, 60045 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003054961.1 MicpuC2_50307, 50307 WD40 repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 50 88
IPR001680 WD40_repeat 11 45
IPR001680 WD40_repeat 149 183
No external refs found!