1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD10147

EOD10147


Description : Apm2, medium subunit of the adaptin 2 complex [Ensembl].


Gene families : OG_01_0000738 (OrthoFinder) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD10147
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021168.13 tig00021168_g19079.t1 AP-2 complex subunit mu OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00021181.5 tig00021181_g19309.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder
Cre06.g262250 30779227, AP1M1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder
Cz02g16120.t1 No alias Mu homology domain [Interproscan]. 0.02 OrthoFinder
Cz13g06120.t1 No alias Mu homology domain [Interproscan]. 0.04 OrthoFinder
Cz13g06130.t1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.04 OrthoFinder
Sro300_g111750.1 Contig270.g3463 AP-2 complex subunit mu 0.02 OrthoFinder
TP14G03430.1 No alias AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54314 54314 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.04 OrthoFinder
XM_003056552.1 MicpuC2_14275, 14275 Mu homology domain; AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000081.1_cds_GFH07212.1_1689 HaLaN_01982, GFH07212 MHD domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000389.1_cds_GFH11275.1_5752 HaLaN_06750, GFH11275 Mu1-adaptin 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57884.1_8711 PRW57884 AP-2 complex subunit mu 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000176 nuclear exosome (RNase complex) IEP Enrichment
CC GO:0000178 exosome (RNase complex) IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR028565 MHD 161 433
IPR022775 AP_mu_sigma_su 1 128
No external refs found!