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  5. Cpa|evm.model.tig00000144.60

Cpa|evm.model.tig00000144.60 (tig00000144_g9051.t1)


Aliases : tig00000144_g9051.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL26 component


Gene families : OG_01_0003267 (OrthoFinder) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000144.60
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre01.g040000 30788495, RPL26 Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 OrthoFinder
Cz06g24050.t1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal [Interproscan]. 0.17 OrthoFinder
Dusal.0160s00007.1 33188333 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.07 OrthoFinder
EOD37550 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.1 OrthoFinder
OT_12G00940.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.13 OrthoFinder
PTI_04G00150.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.19 OrthoFinder
Sro694_g188520.1 Contig4437.g33305 60S ribosomal protein L26 0.23 OrthoFinder
SymbC1.scaffold27.14 27.14 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.01 OrthoFinder
SymbC1.scaffold27.16 27.16 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.02 OrthoFinder
TP05G04810.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.2 OrthoFinder
Vocar.0001s0799.1 32884988 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.08 OrthoFinder
XM_002503926.1 MICPUN_91267, 91267 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.18 OrthoFinder
XM_003055465.1 MicpuC2_30848, 30848 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.1 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60014.1_6792 PRW60014 60S ribosomal L26-1 0.07 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496763.1_492 KAA8496763 60S ribosomal protein L26 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 36 149
IPR005824 KOW 79 110
No external refs found!