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Description : 60s Acidic ribosomal protein [Interproscan].
Gene families : OG_01_0003895 (OrthoFinder) Phylogenetic Tree(s): OG0003895_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD08635 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre17.g738300 | 30782509, RPP1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder | |
| Cz04g14050.t1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_05G03770.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.01 | OrthoFinder | |
| Sro608_g174750.1 | Contig3978.g30558 | 60s Acidic ribosomal protein [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |