1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD08460

EOD08460


Description : ATP-dependent metalloprotease FtsH [Ensembl].


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD08460
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.42 tig00022075_g23603.t1 ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.01 OrthoFinder
OT_09G02820.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
SymbC1.scaffold19.185 19.185 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal;... 0.01 OrthoFinder
SymbC1.scaffold5689.1 5689.1 ATPase, AAA-type, core; Peptidase M41; AAA ATPase, AAA+... 0.01 OrthoFinder
Vocar.0013s0271.1 32896473 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 436 473
IPR003959 ATPase_AAA_core 280 413
No external refs found!