Description : Zinc finger, RING-type [Interproscan].

Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EOD07947
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020943.22 tig00020943_g16264.t1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder
Cre08.g371400 30773476 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cz06g10040.t1 No alias Hypothetical protein 0.01 OrthoFinder
EOD29588 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
EOD30748 No alias Zinc finger, RING-type [Interproscan]. 0.06 OrthoFinder
EOD34961 No alias Zinc finger, RING-type [Interproscan]. 0.06 OrthoFinder
OT_04G04210.1 No alias Zinc finger, RING-type; E3 ubiquitin-protein ligase... 0.02 OrthoFinder
OT_10G01420.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro40_g024590.1 Contig335.g4466 RING finger domain protein 0.01 OrthoFinder
Sro872_g213930.1 Contig2262.g18775 Zinc ion binding 0.01 OrthoFinder
TP03G04320.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_1388 1388 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_56055 56055 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0009s0104.1 32893138 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000750.1_cds_GFH14648.1_9125 HaLaN_10746, GFH14648 RING-type domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000780.1_cds_GFH14902.1_9379 HaLaN_11039, GFH14902 RING-type domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496531.1_260 KAA8496531 E3 ubiquitin-protein ligase RLIM 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496988.1_717 KAA8496988 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497115.1_844 KAA8497115 E3 ubiquitin-protein ligase RNF38 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495598.1_1596 KAA8495598 E3 ubiquitin-protein ligase 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495830.1_1828 KAA8495830 Putative E3 ubiquitin-protein ligase RHC1A 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492975.1_2711 KAA8492975 E3 ubiquitin protein ligase RIE1 0.03 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490872.1_5644 KAA8490872 E3 ubiquitin protein ligase RIE1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0045765 regulation of angiogenesis IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0051239 regulation of multicellular organismal process IEP Enrichment
BP GO:1901342 regulation of vasculature development IEP Enrichment
BP GO:2000026 regulation of multicellular organismal development IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 234 261
No external refs found!