1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD07947

EOD07947


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD07947
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020943.22 tig00020943_g16264.t1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder
Cre08.g371400 30773476 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cz06g10040.t1 No alias Hypothetical protein 0.01 OrthoFinder
EOD29588 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
EOD30748 No alias Zinc finger, RING-type [Interproscan]. 0.06 OrthoFinder
EOD34961 No alias Zinc finger, RING-type [Interproscan]. 0.06 OrthoFinder
OT_04G04210.1 No alias Zinc finger, RING-type; E3 ubiquitin-protein ligase... 0.02 OrthoFinder
OT_10G01420.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro40_g024590.1 Contig335.g4466 RING finger domain protein 0.01 OrthoFinder
Sro872_g213930.1 Contig2262.g18775 Zinc ion binding 0.01 OrthoFinder
TP03G04320.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_1388 1388 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_56055 56055 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0009s0104.1 32893138 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000750.1_cds_GFH14648.1_9125 HaLaN_10746, GFH14648 RING-type domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000780.1_cds_GFH14902.1_9379 HaLaN_11039, GFH14902 RING-type domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496531.1_260 KAA8496531 E3 ubiquitin-protein ligase RLIM 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496988.1_717 KAA8496988 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497115.1_844 KAA8497115 E3 ubiquitin-protein ligase RNF38 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495598.1_1596 KAA8495598 E3 ubiquitin-protein ligase 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495830.1_1828 KAA8495830 Putative E3 ubiquitin-protein ligase RHC1A 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492975.1_2711 KAA8492975 E3 ubiquitin protein ligase RIE1 0.03 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490872.1_5644 KAA8490872 E3 ubiquitin protein ligase RIE1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0045765 regulation of angiogenesis IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0051239 regulation of multicellular organismal process IEP Enrichment
BP GO:1901342 regulation of vasculature development IEP Enrichment
BP GO:2000026 regulation of multicellular organismal development IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 234 261
No external refs found!