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  5. EOD07611

EOD07611


Description : Ribosomal protein L19/L19e [Interproscan].


Gene families : OG_01_0002658 (OrthoFinder) Phylogenetic Tree(s): OG0002658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD07611
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Dusal.0530s00005.1 33203474 Ribosomal protein L19/L19e [Interproscan]. 0.05 OrthoFinder
OT_02G02430.1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.05 OrthoFinder
PTI_21G02720.1 No alias Ribosomal protein L19/L19e; Chlorophyll A-B binding... 0.02 OrthoFinder
Sro734_g194640.1 Contig3769.g28942 60S ribosomal protein L19 0.02 OrthoFinder
Vocar.0001s1683.1 32884888 Ribosomal protein L19/L19e [Interproscan]. 0.01 OrthoFinder
XM_002507605.1 MICPUN_112659, 112659 60S ribosomal protein L19 (RPL19) 0.03 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32847.1_3748 PRW32847 60S ribosomal L19-2 isoform B 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0006885 regulation of pH IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0055067 monovalent inorganic cation homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 5 58
No external refs found!