EOD07483

Description : ATP-dependent metalloprotease FtsH [Ensembl].

Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD07483
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021179.74	tig00021179_g19288.t1	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.01	OrthoFinder
Cre12.g485800	30791981, FHL1	Protein degradation.peptidase families.metallopeptidase...	0.05	OrthoFinder
Cre17.g720050	30782442, FHL2	Protein degradation.peptidase families.metallopeptidase...	0.06	OrthoFinder
Cz02g25060.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.04	OrthoFinder
Cz03g27160.t1	No alias	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.02	OrthoFinder
OT_01G04960.1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.03	OrthoFinder
OT_16G00870.1	No alias	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.01	OrthoFinder
Sro758_g198040.1	Contig434.g5856	Zinc metalloprotease FTSH, chloroplastic	0.06	OrthoFinder
Vocar.0016s0146.1	32898067	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.03	OrthoFinder
XM_003057108.1	MicpuC2_55999, 55999	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.02	OrthoFinder
lcl\|BLLF01002869.1_cds_GFH25630.1_20107	HaLaN_23625, GFH25630	Extracellular protease	0.02	OrthoFinder
lcl\|BLLF01003298.1_cds_GFH26952.1_21429	HaLaN_25189, GFH26952	AAA domain-containing protein	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499595.1_8548	KAA8499595	ATP-dependent zinc metalloprotease FtsH 3	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Enrichment
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Enrichment
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Enrichment
MF	GO:0005319	lipid transporter activity	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006788	heme oxidation	IEP	Enrichment
BP	GO:0006869	lipid transport	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0010207	photosystem II assembly	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Enrichment
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
BP	GO:0042440	pigment metabolic process	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
BP	GO:0061024	membrane organization	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment
BP	GO:0120009	intermembrane lipid transfer	IEP	Enrichment
MF	GO:0120013	lipid transfer activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	398	435
IPR000642	Peptidase_M41	460	645
IPR003959	ATPase_AAA_core	241	374

External Links

No external refs found!

EOD07483

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation