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  5. EOD07302

EOD07302


Description : Ribosomal protein S12/S23 [Interproscan].


Gene families : OG_01_0004164 (OrthoFinder) Phylogenetic Tree(s): OG0004164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD07302
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001264.27 tig00001264_g7883.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 OrthoFinder
Cre12.g504200 30792072, RPS23 Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 OrthoFinder
Cz02g32260.t1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.15 OrthoFinder
Dusal.0029s00015.1 33203771 Ribosomal protein S12/S23 [Interproscan]. 0.09 OrthoFinder
OT_06G01850.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.04 OrthoFinder
PTI_02G00080.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.16 OrthoFinder
Sro922_g220630.1 Contig2958.g23506 40S ribosomal protein S23 0.19 OrthoFinder
SymbC1.scaffold7066.3 7066.3 Ribosomal protein S12/S23 [Interproscan]. 0.02 OrthoFinder
TP05G01460.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.16 OrthoFinder
XM_002499719.1 MICPUN_89912, 89912 Ribosomal protein S12/S23 [Interproscan]. 0.17 OrthoFinder
XM_003062101.1 MicpuC2_48397, 48397 Ribosomal protein S12/S23 [Interproscan]. 0.1 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45112.1_1697 PRW45112 40S ribosomal S23 0.12 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497390.1_1119 KAA8497390 40S ribosomal protein S23 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071569 protein ufmylation IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 32 144
No external refs found!