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  5. EOD07048

EOD07048


Description : Ubiquitin-like domain; Fibrillarin [Interproscan].


Gene families : OG_01_0002387 (OrthoFinder) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD07048
Cluster HCCA: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001049.16 tig00001049_g6665.t1 RNA processing.RNA modification.rRNA/tRNA... 0.05 OrthoFinder
Cre02.g077300 30785723, NOP1 RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder
Cz10g07040.t1 No alias Fibrillarin [Interproscan]. 0.04 OrthoFinder
Dusal.0325s00010.1 33191960 Fibrillarin [Interproscan]. 0.01 OrthoFinder
Sro1226_g254200.1 Contig1389.g12811 RRNA 2'-O-methyltransferase fibrillarin 0.02 OrthoFinder
Transcript_contig_54582 54582 Fibrillarin [Interproscan]. 0.02 OrthoFinder
Vocar.0030s0076.1 32894520 Fibrillarin [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000026.1_cds_GFH06193.1_670 HaLaN_00783, GFH06193 Fibrillarin [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000255.1_cds_GFH09702.1_4179 HaLaN_04892, GFH09702 Mediator of RNA polymerase II transcription subunit 36a 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59290.1_6872 PRW59290 RRNA 2-O-methyltransferase fibrillarin 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000692 Fibrillarin 137 367
IPR000626 Ubiquitin-like_dom 7 76
No external refs found!