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  5. EOD06805

EOD06805


Description : Aps1, sigma subunit of the adaptin 1 complex [Ensembl].


Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD06805
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Cre07.g324600 30775415, AP2S2 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder
Cre07.g330950 30774543, AP4S4 Vesicle trafficking.endomembrane trafficking.vacuolar... 0.04 OrthoFinder
Cre09.g394100 30781425, AP1S1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.08 OrthoFinder
Cz01g45020.t1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
OT_10G02930.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
OT_16G00570.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
PTI_09G03200.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
PTI_13G00760.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
PTI_18G01760.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
Sro782_g201730.1 Contig2391.g19597 AP-2 complex subunit sigma 0.02 OrthoFinder
Sro9_g007570.1 Contig4120.g31525 AP-1 complex subunit sigma 0.04 OrthoFinder
Transcript_contig_295 295 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55878 55878 AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
UNPLg00105.t1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
XM_002503387.1 MICPUN_83744, 83744 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
XM_003055645.1 MicpuC2_24442, 24442 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
XM_003061069.1 MicpuC2_45744, 45744 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001024.1_cds_GFH16617.1_11094 HaLaN_13069, GFH16617 AP complex subunit sigma 0.01 OrthoFinder
lcl|BLLF01002148.1_cds_GFH22899.1_17376 HaLaN_20429, GFH22899 AP complex subunit sigma 0.01 OrthoFinder
lcl|BLLF01002367.1_cds_GFH23805.1_18282 HaLaN_21486, GFH23805 AP complex subunit sigma 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW58003.1_8612 PRW58003 AP-1 complex subunit sigma-1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 3 138
No external refs found!