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  5. Cpa|evm.model.tig00020911.62

Cpa|evm.model.tig00020911.62 (tig00020911_g15766.t1)


Aliases : tig00020911_g15766.t1

No description available


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020911.62
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.39 tig00000025_g7945.t1 No description available 0.09 OrthoFinder
Cpa|evm.model.tig00000246.18 tig00000246_g21511.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000317.33 tig00000317_g24044.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020806.24 tig00020806_g14044.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021534.6 tig00021534_g22247.t1 No description available 0.03 OrthoFinder
Cre07.g319650 30775131, FXL4 No description available 0.02 OrthoFinder
Cre10.g429750 30790138 No description available 0.02 OrthoFinder
Cre10.g457331 30790915 No description available 0.02 OrthoFinder
Cre10.g457400 30790407 No description available 0.02 OrthoFinder
Cre13.g586650 30783981, FXL1 No description available 0.02 OrthoFinder
Cre17.g698903 30781618 No description available 0.02 OrthoFinder
Cz03g08250.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz04g22190.t1 No alias Hypothetical protein 0.03 OrthoFinder
Cz06g35270.t1 No alias Hypothetical protein 0.03 OrthoFinder
Cz06g35280.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz06g35290.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz06g35300.t1 No alias Hypothetical protein 0.03 OrthoFinder
Cz12g28200.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0051s00004.1 33199001 PAS domain [Interproscan]. 0.03 OrthoFinder
Dusal.0439s00004.1 33199603 Hypothetical protein 0.02 OrthoFinder
Dusal.0439s00005.1 33199605 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0729s00003.1 33203053 PAS domain [Interproscan]. 0.03 OrthoFinder
Vocar.0013s0285.1 32896440 PAS fold [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000301.1_cds_GFH10268.1_4745 HaLaN_05550, GFH10268 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000429.1_cds_GFH11722.1_6199 HaLaN_07268, GFH11722 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000993.1_cds_GFH16401.1_10878 HaLaN_12813, GFH16401 Tiny macrocysts protein B 0.03 OrthoFinder
lcl|BLLF01001107.1_cds_GFH17174.1_11651 HaLaN_13746, GFH17174 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001945.1_cds_GFH21989.1_16466 HaLaN_19386, GFH21989 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01006378.1_cds_GFH32196.1_26673 HaLaN_31377, GFH32196 PAS domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013656 PAS_4 667 765
IPR000014 PAS 780 900
IPR000014 PAS 1130 1234
IPR000014 PAS 908 997
No external refs found!