EOD06458

Description : DEAD/DEAH box helicase domain [Interproscan].

Gene families : OG_01_0001369 (OrthoFinder) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD06458
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
Cz12g25040.t1	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.01	OrthoFinder
Transcript_contig_54291	54291	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.02	OrthoFinder
lcl\|LHPG02000004.1_cds_PRW59022.1_7074	PRW59022	DEAD-box ATP-dependent RNA helicase 8	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0051259	protein complex oligomerization	IEP	Enrichment
BP	GO:0051260	protein homooligomerization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	64	178

External Links

No external refs found!