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EOD06447


Description : Choline dehydrogenase [Ensembl].


Gene families : OG_01_0001078 (OrthoFinder) Phylogenetic Tree(s): OG0001078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD06447
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.63 tig00000113_g5640.t1 (R)-mandelonitrile lyase 2 OS=Prunus dulcis 0.02 OrthoFinder
Sro167_g074540.1 Contig2973.g23635 Choline dehydrogenase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 199 346
IPR000172 GMC_OxRdtase_N 3 82
No external refs found!