Description : Ribosomal protein S27e [Interproscan].

Gene families : OG_01_0000897 (OrthoFinder) Phylogenetic Tree(s): OG0000897_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EOD06206
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001299.2 tig00001299_g8061.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Cre02.g145250 30786491, RPS27e2 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder
Cre12.g529400 30792485, RPS27e1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 OrthoFinder
Dusal.0308s00024.1 33194639 Ribosomal protein S27e [Interproscan]. 0.04 OrthoFinder
OT_16G00070.1 No alias Ribosomal protein S27e [Interproscan]. 0.06 OrthoFinder
PTI_00G03050.1 No alias Ribosomal protein S27e [Interproscan]. 0.14 OrthoFinder
TP14G02220.1 No alias Ribosomal protein S27e [Interproscan]. 0.2 OrthoFinder
Transcript_contig_80055 80055 Ribosomal protein S27e [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0179.1 32894162 Hypothetical protein 0.02 OrthoFinder
Vocar.0037s0078.1 32897515 Ribosomal protein S27e [Interproscan]. 0.07 OrthoFinder
XM_002502682.1 MICPUN_108364, 108364 Ribosomal protein S27e [Interproscan]. 0.15 OrthoFinder
lcl|BLLF01002835.1_cds_GFH25509.1_19986 HaLaN_23488, GFH25509 40S ribosomal protein S27 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05814.1_5981 PRW05814 Plant intracellular Ras-group-related LRR 7 isoform B 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 27 81
No external refs found!