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  5. EOD06100

EOD06100


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0000615 (OrthoFinder) Phylogenetic Tree(s): OG0000615_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD06100
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000789.15 tig00000789_g4108.t1 Helicase and polymerase-containing protein TEBICHI... 0.01 OrthoFinder
Cre08.g384390 30774104 Helicase and polymerase-containing protein TEBICHI... 0.03 OrthoFinder
Cre16.g664301 30777592 DNA damage response.DNA repair polymerase activities.DNA... 0.03 OrthoFinder
OT_05G00350.1 No alias DNA-directed DNA polymerase, family A, palm domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 1102 1182
IPR011545 DEAD/DEAH_box_helicase_dom 746 942
No external refs found!