Cpa|evm.model.tig00020909.40 (tig00020909_g15361.t1)

Aliases : tig00020909_g15361.t1

Description : Coenzyme metabolism.FMN/FAD biosynthesis.lumazine synthase (RibE)

Gene families : OG_01_0001901 (OrthoFinder) Phylogenetic Tree(s): OG0001901_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020909.40
Cluster	HCCA: Cluster_56

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Enrichment
MF	GO:0004602	glutathione peroxidase activity	IEP	Enrichment
MF	GO:0004843	thiol-dependent deubiquitinase	IEP	Enrichment
CC	GO:0005743	mitochondrial inner membrane	IEP	Enrichment
BP	GO:0006400	tRNA modification	IEP	Enrichment
BP	GO:0006979	response to oxidative stress	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
MF	GO:0008242	omega peptidase activity	IEP	Enrichment
BP	GO:0009451	RNA modification	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Enrichment
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Enrichment
CC	GO:0019866	organelle inner membrane	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0031966	mitochondrial membrane	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment
MF	GO:0101005	deubiquitinase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	6	45
IPR002180	LS/RS	235	376

External Links

No external refs found!

Cpa|evm.model.tig00020909.40 (tig00020909_g15361.t1)

Expression Profile

Co-expression Networks

Functional Annotation