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  5. Cpa|evm.model.tig00000144.24

Cpa|evm.model.tig00000144.24 (tig00000144_g9013.t1)


Aliases : tig00000144_g9013.t1

Description : Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana


Gene families : OG_01_0003474 (OrthoFinder) Phylogenetic Tree(s): OG0003474_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000144.24
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Vocar.0006s0175.1 32894202 Pre-mRNA-splicing factor 38 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR005037 PRP38 11 173
No external refs found!