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  5. EOD04929

EOD04929


Description : DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0001024 (OrthoFinder) Phylogenetic Tree(s): OG0001024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD04929
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
Cre12.g526850 30793359 DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz18g09010.t1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
EOD15883 No alias DEAD/DEAH box helicase domain [Interproscan]. 0.05 OrthoFinder
OT_01G05020.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.04 OrthoFinder
PTI_02G06960.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.04 OrthoFinder
Sro216_g089540.1 Contig227.g2731 RNA helicase DBP9 0.03 OrthoFinder
Transcript_contig_71372 71372 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
XM_002507290.1 MICPUN_113907, 113907 Helicase 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495020.1_3550 KAA8495020 ATP-dependent RNA helicase dbp9 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 30 116
No external refs found!