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  5. EOD04880

EOD04880


Description : Alpha-tubulin [Ensembl].


Gene families : OG_01_0002235 (OrthoFinder) Phylogenetic Tree(s): OG0002235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD04880
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cre06.g299300 30778635, TUG1 Cytoskeleton.microtubular network.microtubule Tubulin... 0.01 OrthoFinder
EOD20889 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
XM_002504188.1 MICPUN_84777, 84777 Tubulin gamma chain (TUBG) 0.02 OrthoFinder
XM_003060083.1 MicpuC2_27658, 27658 Tubulin gamma chain (TUBG) 0.02 OrthoFinder
lcl|BLLF01003482.1_cds_GFH27457.1_21934 HaLaN_25781, GFH27457 Tubulin gamma chain 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 4 230
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 280 412
No external refs found!