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  5. Cpa|evm.model.tig00020904.44

Cpa|evm.model.tig00020904.44 (tig00020904_g15177.t1)


Aliases : tig00020904_g15177.t1

Description : Splicing factor-like protein 1 OS=Arabidopsis thaliana


Gene families : OG_01_0001774 (OrthoFinder) Phylogenetic Tree(s): OG0001774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020904.44
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
EOD32005 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
PTI_01G05780.1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
PTI_06G02030.1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 62 131
IPR000504 RRM_dom 337 407
No external refs found!