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  5. EOD04504

EOD04504


Description : Splicing factor 3B subunit 5/RDS3 complex subunit 10 [Interproscan].


Gene families : OG_01_0004205 (OrthoFinder) Phylogenetic Tree(s): OG0004205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD04504
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cre14.g627900 30776652 RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder
PTI_03G05750.1 No alias Splicing factor 3B subunit 5/RDS3 complex subunit 10... 0.01 OrthoFinder
Sro279_g106800.1 Contig3140.g24919 Splicing factor 3b subunit 0.03 OrthoFinder
XM_003056813.1 MicpuC2_14638, 14638 Splicing factor 3B subunit 5/RDS3 complex subunit 10... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016556 mRNA modification IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0080009 mRNA methylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR009846 SF3b5/RDS3-10 5 82
No external refs found!