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  5. Dusal.1167s00001.1

Dusal.1167s00001.1 (33192830)


Aliases : 33192830

Description : Exoribonuclease, phosphorolytic domain 2; Exoribonuclease, phosphorolytic domain 1 [Interproscan].


Gene families : OG_01_0000474 (OrthoFinder) Phylogenetic Tree(s): OG0000474_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.1167s00001.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cre03.g175000 30787917 RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 OrthoFinder
EOD09221 No alias Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45550.1_1622 PRW45550 Exosome complex component RRP43 isoform B 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45551.1_1623 PRW45551 Exosome complex component RRP43 isoform A 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495726.1_1724 KAA8495726 Exosome complex component rrp45 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 215 278
IPR001247 ExoRNase_PH_dom1 34 170
No external refs found!