Cpa|evm.model.tig00020892.22 (tig00020892_g14923.t1)

Aliases : tig00020892_g14923.t1

Description : ABC transporter G family member 51 OS=Oryza sativa subsp. japonica

Gene families : OG_01_0000300 (OrthoFinder) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020892.22
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre11.g467597	30775994	Solute transport.primary active transport.ABC...	0.01	OrthoFinder
Cre12.g540650	30793452	Solute transport.primary active transport.ABC...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Enrichment
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Enrichment
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
MF	GO:0070008	serine-type exopeptidase activity	IEP	Enrichment
CC	GO:0099023	vesicle tethering complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	565	773
IPR003439	ABC_transporter-like_ATP-bd	261	406
IPR003439	ABC_transporter-like_ATP-bd	946	1089

External Links

No external refs found!