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  5. Dusal.0818s00002.1

Dusal.0818s00002.1 (33187127)


Aliases : 33187127

Description : 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type [Interproscan].


Gene families : OG_01_0001970 (OrthoFinder) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0818s00002.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
EOD11746 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.01 OrthoFinder
OT_09G00940.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
Sro162_g072810.1 Contig2670.g21617 Hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.02 OrthoFinder
TP08G03920.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.03 OrthoFinder
Vocar.0031s0090.1 32890075 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
XM_002506190.1 MICPUN_95921, 95921 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
lcl|BLLF01001748.1_cds_GFH21030.1_15507 HaLaN_18253, GFH21030 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44903.1_2058 PRW44903 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0042822 pyridoxal phosphate metabolic process IEP Enrichment
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Enrichment
BP GO:0046184 aldehyde biosynthetic process IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004588 IspG_bac-typ 491 624
IPR004588 IspG_bac-typ 65 112
IPR004588 IspG_bac-typ 113 253
No external refs found!