Cpa|evm.model.tig00020850.3 (tig00020850_g14673.t1)

Aliases : tig00020850_g14673.t1

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.VPS28 component

Gene families : OG_01_0003874 (OrthoFinder) Phylogenetic Tree(s): OG0003874_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020850.3
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Cre16.g678100 30777253, VPS28 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.06 OrthoFinder
Dusal.0849s00003.1 33190876 Vacuolar protein sorting-associated Vps28 [Interproscan]. 0.04 OrthoFinder
Sro1136_g245250.1 Contig1812.g15977 Protein sorting-associated protein 28 homolog 0.05 OrthoFinder
lcl|BLLF01000745.1_cds_GFH14590.1_9067 HaLaN_10678, GFH14590 Vacuolar protein sorting-associated protein 28 homolog 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEA Interproscan
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR007143 Vps28 177 250
IPR007143 Vps28 91 157
No external refs found!