Cpa|evm.model.tig00020850.3 (tig00020850_g14673.t1)

Aliases : tig00020850_g14673.t1

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.VPS28 component

Gene families : OG_01_0003874 (OrthoFinder) Phylogenetic Tree(s): OG0003874_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020850.3
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
Cre16.g678100	30777253, VPS28	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.06	OrthoFinder
Dusal.0849s00003.1	33190876	Vacuolar protein sorting-associated Vps28 [Interproscan].	0.04	OrthoFinder
Sro1136_g245250.1	Contig1812.g15977	Protein sorting-associated protein 28 homolog	0.05	OrthoFinder
lcl\|BLLF01000745.1_cds_GFH14590.1_9067	HaLaN_10678, GFH14590	Vacuolar protein sorting-associated protein 28 homolog	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004843	thiol-dependent deubiquitinase	IEP	Enrichment
MF	GO:0005319	lipid transporter activity	IEP	Enrichment
MF	GO:0005548	phospholipid transporter activity	IEP	Enrichment
BP	GO:0007155	cell adhesion	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
MF	GO:0008242	omega peptidase activity	IEP	Enrichment
CC	GO:0016459	myosin complex	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Enrichment
BP	GO:0022610	biological adhesion	IEP	Enrichment
MF	GO:0101005	deubiquitinase activity	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007143	Vps28	177	250
IPR007143	Vps28	91	157

External Links

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Cpa|evm.model.tig00020850.3 (tig00020850_g14673.t1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation