Aliases : 33197124
Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].
Gene families : OG_01_0002942 (OrthoFinder) Phylogenetic Tree(s): OG0002942_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dusal.0659s00006.1 | |
Cluster | HCCA: Cluster_115 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020943.85 | tig00020943_g16324.t1 | DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... | 0.05 | OrthoFinder | |
Cre01.g022350 | 30788877 | DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana | 0.04 | OrthoFinder | |
Cz07g11140.t1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
EOD12093 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
OT_13G01240.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
PTI_08G00230.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.05 | OrthoFinder | |
Sro1969_g308510.1 | Contig3149.g24979 | Dependent RNA helicase | 0.01 | OrthoFinder | |
Transcript_contig_57722 | 57722 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
Vocar.0007s0285.1 | 32887858 | DEAD/DEAH box helicase domain; Helicase, C-terminal... | 0.03 | OrthoFinder | |
XM_002503322.1 | MICPUN_59612, 59612 | Helicase | 0.04 | OrthoFinder | |
XM_003058331.1 | MicpuC2_39643, 39643 | Helicase | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000178 | exosome (RNase complex) | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003883 | CTP synthase activity | IEP | Enrichment |
MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Enrichment |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | Enrichment |
BP | GO:0015858 | nucleoside transport | IEP | Enrichment |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Enrichment |
MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Enrichment |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
CC | GO:0030120 | vesicle coat | IEP | Enrichment |
CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
CC | GO:0030684 | preribosome | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
BP | GO:0036211 | protein modification process | IEP | Enrichment |
BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Enrichment |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901642 | nucleoside transmembrane transport | IEP | Enrichment |
CC | GO:1905354 | exoribonuclease complex | IEP | Enrichment |
No external refs found! |