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Aliases : tig00020848_g14605.t1
Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-2 component
Gene families : OG_01_0002503 (OrthoFinder) Phylogenetic Tree(s): OG0002503_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00020848.74 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_08G00690.1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.02 | OrthoFinder | |
| TP16G01250.1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|LHPG02000006.1_cds_PRW57945.1_8500 | PRW57945 | Proteasome subunit beta type-7-A | 0.02 | OrthoFinder | |
| lcl|VRMN01000008.1_cds_KAA8492784.1_2520 | KAA8492784 | Proteasome subunit beta type-7-B | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004298 | threonine-type endopeptidase activity | IEA | Interproscan |
| CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006996 | organelle organization | IEP | Enrichment |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Enrichment |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Enrichment |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015297 | antiporter activity | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| BP | GO:0022402 | cell cycle process | IEP | Enrichment |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001353 | Proteasome_sua/b | 24 | 204 |
| No external refs found! |