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  5. Cpa|evm.model.tig00020830.84

Cpa|evm.model.tig00020830.84 (tig00020830_g14467.t1)


Aliases : tig00020830_g14467.t1

Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-4 component


Gene families : OG_01_0002648 (OrthoFinder) Phylogenetic Tree(s): OG0002648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020830.84
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cre01.g030850 30789302, POA4 Protein degradation.26S proteasome.20S core... 0.12 OrthoFinder
Dusal.0579s00008.1 33194030 Proteasome, subunit alpha/beta; Proteasome... 0.01 OrthoFinder
OT_01G05060.1 No alias Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.06 OrthoFinder
PTI_04G03080.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.07 OrthoFinder
Sro27_g018180.1 Contig3926.g30079 Alpha type-7 0.1 OrthoFinder
TP01G06380.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.06 OrthoFinder
Vocar.0001s0951.1 32885595 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57180.1_8893 PRW57180 Proteasome subunit alpha type-7 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499593.1_8546 KAA8499593 Proteasome subunit alpha type-7 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 28 209
No external refs found!