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  5. Dusal.0479s00005.1

Dusal.0479s00005.1 (33193185)


Aliases : 33193185

Description : Ribosomal protein L13 [Interproscan].


Gene families : OG_01_0003121 (OrthoFinder) Phylogenetic Tree(s): OG0003121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0479s00005.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.29 tig00000792_g4178.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
Cz05g22130.t1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_02G04390.1 No alias Ribosomal protein L13 [Interproscan]. 0.02 OrthoFinder
Sro678_g186000.1 Contig2726.g21985 60S ribosomal protein L13a (Fragment) 0.03 OrthoFinder
TP04G09050.1 No alias Hypothetical protein 0.03 OrthoFinder
XM_002507201.1 MICPUN_93104, 93104 Ribosomal protein L13 [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 5 112
No external refs found!