Cpa|evm.model.tig00020825.19 (tig00020825_g14300.t1)

Aliases : tig00020825_g14300.t1

Description : Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana

Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020825.19
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
EOD18155	No alias	High mobility group box domain; ISWI, HAND domain;...	0.02	OrthoFinder
Sro264_g102660.1	Contig921.g9692	Probable chromatin-remodeling complex ATPase chain	0.01	OrthoFinder
XM_003061140.1	MicpuC2_28265, 28265	SNF2 super family	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
CC	GO:0005783	endoplasmic reticulum	IEP	Enrichment
BP	GO:0006325	chromatin organization	IEP	Enrichment
BP	GO:0006338	chromatin remodeling	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0031491	nucleosome binding	IEP	Enrichment
CC	GO:0043226	organelle	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043229	intracellular organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
MF	GO:0044877	protein-containing complex binding	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	1139	1249
IPR000330	SNF2_N	813	1094

External Links

No external refs found!