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  5. Dusal.0399s00005.1

Dusal.0399s00005.1 (33191733)


Aliases : 33191733

Description : Manganese/iron superoxide dismutase, N-terminal; Manganese/iron superoxide dismutase, C-terminal [Interproscan].


Gene families : OG_01_0000261 (OrthoFinder) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0399s00005.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Sro1438_g272630.1 Contig3435.g26742 Superoxide dismutase [Mn], mitochondrial (Fragment) 0.01 OrthoFinder
Sro2419_g327070.1 Contig1625.g14665 Superoxide dismutase [Mn], mitochondrial (Fragment) 0.01 OrthoFinder
Sro882_g215360.1 Contig1771.g15679 Superoxide dismutase [Fe] 0.02 OrthoFinder
lcl|BLLF01000263.1_cds_GFH09788.1_4265 HaLaN_04997, GFH09788 Superoxide dismutase 0.02 OrthoFinder
lcl|BLLF01003782.1_cds_GFH28207.1_22684 HaLaN_26659, GFH28207 Superoxide dismutase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR019832 Mn/Fe_SOD_C 100 204
IPR019831 Mn/Fe_SOD_N 3 91
No external refs found!