Dusal.0390s00008.1 (33199535)


Aliases : 33199535

Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0390s00008.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001049.35 tig00001049_g6681.t1 DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... 0.02 OrthoFinder
Cre12.g522850 30792053 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.02 OrthoFinder
Cre12.g540200 30792196 DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... 0.05 OrthoFinder
Cz07g14080.t1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
Cz11g20100.t1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
EOD31868 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
OT_07G01830.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
OT_10G00150.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
OT_12G00350.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain; WW... 0.02 OrthoFinder
PTI_00G03690.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
PTI_04G04860.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
Sro1046_g235060.1 Contig1884.g16427 Dependent RNA helicase 0.01 OrthoFinder
Sro1103_g241740.1 Contig4430.g33251 Dependent RNA helicase 0.02 OrthoFinder
SymbC1.scaffold406.3 406.3 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
TP01G06480.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
TP03G06040.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Vocar.0007s0049.1 32888024 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.03 OrthoFinder
Vocar.0065s0019.1 32886834 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
XM_002499634.1 MICPUN_67469, 67469 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.05 OrthoFinder
XM_002502614.1 MICPUN_58886, 58886 DEAD/DEAH box helicase 0.01 OrthoFinder
XM_002504616.1 MICPUN_97883, 97883 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.05 OrthoFinder
XM_003058098.1 MicpuC2_16111, 16111 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
lcl|BLLF01000115.1_cds_GFH07782.1_2259 HaLaN_02635, GFH07782 DEAD box RNA helicase 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60953.1_66 PRW60953 DEAD-box ATP-dependent RNA helicase 5 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 466 575
IPR011545 DEAD/DEAH_box_helicase_dom 255 427
No external refs found!