Aliases : 33199535
Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].
Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dusal.0390s00008.1 | |
Cluster | HCCA: Cluster_160 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001049.35 | tig00001049_g6681.t1 | DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... | 0.02 | OrthoFinder | |
Cre12.g522850 | 30792053 | DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... | 0.02 | OrthoFinder | |
Cre12.g540200 | 30792196 | DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... | 0.05 | OrthoFinder | |
Cz07g14080.t1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
Cz11g20100.t1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
EOD31868 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
OT_07G01830.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.01 | OrthoFinder | |
OT_10G00150.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
OT_12G00350.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain; WW... | 0.02 | OrthoFinder | |
PTI_00G03690.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
PTI_04G04860.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.01 | OrthoFinder | |
Sro1046_g235060.1 | Contig1884.g16427 | Dependent RNA helicase | 0.01 | OrthoFinder | |
Sro1103_g241740.1 | Contig4430.g33251 | Dependent RNA helicase | 0.02 | OrthoFinder | |
SymbC1.scaffold406.3 | 406.3 | DEAD/DEAH box helicase domain; Helicase, C-terminal... | 0.02 | OrthoFinder | |
TP01G06480.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
TP03G06040.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
Vocar.0007s0049.1 | 32888024 | DEAD/DEAH box helicase domain; Helicase, C-terminal... | 0.03 | OrthoFinder | |
Vocar.0065s0019.1 | 32886834 | DEAD/DEAH box helicase domain; Helicase, C-terminal... | 0.02 | OrthoFinder | |
XM_002499634.1 | MICPUN_67469, 67469 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.05 | OrthoFinder | |
XM_002502614.1 | MICPUN_58886, 58886 | DEAD/DEAH box helicase | 0.01 | OrthoFinder | |
XM_002504616.1 | MICPUN_97883, 97883 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.05 | OrthoFinder | |
XM_003058098.1 | MicpuC2_16111, 16111 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
lcl|BLLF01000115.1_cds_GFH07782.1_2259 | HaLaN_02635, GFH07782 | DEAD box RNA helicase | 0.02 | OrthoFinder | |
lcl|LHPG02000001.1_cds_PRW60953.1_66 | PRW60953 | DEAD-box ATP-dependent RNA helicase 5 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
BP | GO:0006414 | translational elongation | IEP | Enrichment |
BP | GO:0008033 | tRNA processing | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
No external refs found! |