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  5. Dusal.0381s00015.1

Dusal.0381s00015.1 (33189380)


Aliases : 33189380

Description : Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0010797 (OrthoFinder) Phylogenetic Tree(s): OG0010797_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0381s00015.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre01.g068012 30789272, PPR5 No description available 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 284 306
IPR002885 Pentatricopeptide_repeat 249 276
IPR002885 Pentatricopeptide_repeat 141 168
IPR002885 Pentatricopeptide_repeat 324 346
No external refs found!