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  5. Cpa|evm.model.tig00000144.126

Cpa|evm.model.tig00000144.126 (tig00000144_g9121.t1)


Aliases : tig00000144_g9121.t1

Description : Probable RNA helicase SDE3 OS=Arabidopsis thaliana


Gene families : OG_01_0001226 (OrthoFinder) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000144.126
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cz05g23170.t1 No alias DNA2/NAM7 helicase-like, AAA domain [Interproscan]. 0.02 OrthoFinder
Cz05g23190.t1 No alias Hypothetical protein 0.01 OrthoFinder
OT_05G04970.1 No alias AAA domain; DNA2/NAM7 helicase-like, AAA domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57862.1_8674 PRW57862 Helicase MOV-10 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 515 565
IPR041679 DNA2/NAM7-like_C 634 724
No external refs found!