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  5. Cpa|evm.model.tig00020801.48

Cpa|evm.model.tig00020801.48 (tig00020801_g13931.t1)


Aliases : tig00020801_g13931.t1

Description : Histone H3.3 OS=Vitis vinifera


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020801.48
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000381.14 tig00000970_g5845.t1 Histone H3.3a OS=Lilium longiflorum 0.05 OrthoFinder
Cpa|evm.model.tig00020598.3 tig00020876_g14837.t1 Histone H3.3a OS=Lilium longiflorum 0.03 OrthoFinder
Vocar.0002s0595.1 32891186 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0042.1 32894081 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Vocar.0027s0142.1 32887220 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 142
No external refs found!