Dusal.0190s00012.1 (33189449)

Aliases : 33189449

Description : Ribosomal protein L38e [Interproscan].

Gene families : OG_01_0004462 (OrthoFinder) Phylogenetic Tree(s): OG0004462_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Dusal.0190s00012.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021719.6 tig00021719_g23151.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cre07.g325746 30775115, RPL38 Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder
Cz01g08210.t1 No alias Ribosomal protein L38e [Interproscan]. 0.11 OrthoFinder
OT_11G02560.1 No alias Ribosomal protein L38e [Interproscan]. 0.04 OrthoFinder
PTI_05G02170.1 No alias Ribosomal protein L38e [Interproscan]. 0.07 OrthoFinder
TP02G00250.1 No alias Ribosomal protein L38e [Interproscan]. 0.09 OrthoFinder
Vocar.0003s0165.1 32889359 Ribosomal protein L38e [Interproscan]. 0.03 OrthoFinder
XM_002508915.1 MICPUN_63254, 63254 Ribosomal protein L38e [Interproscan]. 0.07 OrthoFinder
XM_003061755.1 MicpuC2_51368, 51368 Ribosomal protein L38e [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59048.1_7123 PRW59048 60S ribosomal L38 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 18 85
No external refs found!