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Aliases : tig00020780_g13760.t1
Description : AP-2 complex subunit sigma OS=Arabidopsis thaliana
Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00020780.8 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre07.g324600 | 30775415, AP2S2 | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.04 | OrthoFinder | |
| Cz01g45020.t1 | No alias | AP complex, mu/sigma subunit [Interproscan]. | 0.03 | OrthoFinder | |
| TP04G02440.1 | No alias | AP complex, mu/sigma subunit [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_295 | 295 | AP complex, mu/sigma subunit [Interproscan]. | 0.01 | OrthoFinder | |
| UNPLg00105.t1 | No alias | AP complex, mu/sigma subunit [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01002148.1_cds_GFH22899.1_17376 | HaLaN_20429, GFH22899 | AP complex subunit sigma | 0.02 | OrthoFinder | |
| lcl|LHPG02000006.1_cds_PRW58003.1_8612 | PRW58003 | AP-1 complex subunit sigma-1 | 0.02 | OrthoFinder | |
| lcl|LHPG02000012.1_cds_PRW44838.1_1803 | PRW44838 | AP-2 complex subunit sigma | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019829 | ATPase-coupled cation transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Enrichment |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022775 | AP_mu_sigma_su | 1 | 140 |
| No external refs found! |