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  5. Cpa|evm.model.tig00020780.14

Cpa|evm.model.tig00020780.14 (tig00020780_g13766.t1)


Aliases : tig00020780_g13766.t1

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS21 component


Gene families : OG_01_0003705 (OrthoFinder) Phylogenetic Tree(s): OG0003705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020780.14
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre03.g203450 30787782, RPS21 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder
Dusal.0001s00040.1 33198798 Ribosomal protein S21e [Interproscan]. 0.06 OrthoFinder
OT_16G01860.1 No alias Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
PTI_25G00250.1 No alias Ribosomal protein S21e [Interproscan]. 0.06 OrthoFinder
Sro6_g004850.1 Contig175.g1990 40S ribosomal protein S21 0.07 OrthoFinder
TP04G05880.1 No alias Ribosomal protein S21e [Interproscan]. 0.02 OrthoFinder
XM_002506478.1 MICPUN_109558, 109558 Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
XM_003063433.1 MicpuC2_45937, 45937 Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60607.1_4698 PRW60607 40S ribosomal S21-2 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498324.1_7277 KAA8498324 40S ribosomal protein S21 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 8 86
No external refs found!