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  5. Cpa|evm.model.tig00020770.4

Cpa|evm.model.tig00020770.4 (tig00020770_g13696.t1)


Aliases : tig00020770_g13696.t1

No description available


Gene families : OG_01_0000258 (OrthoFinder) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020770.4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000097.3 tig00000097_g3995.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.05 OrthoFinder
Cpa|evm.model.tig00000381.10 tig00021319_g20263.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.02 OrthoFinder
Cpa|evm.model.tig00000444.2 tig00021332_g20320.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000444.3 tig00000444_g793.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000489.22 tig00000607_g2516.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000489.25 tig00000097_g3993.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000520.3 tig00021319_g20263.t1 No description available 0.08 OrthoFinder
Cpa|evm.model.tig00000581.2 tig00001052_g6619.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020531.10 tig00020531_g10039.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020746.23 tig00000381_g24542.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020770.7 tig00021319_g20263.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021326.26 tig00000381_g24536.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.03 OrthoFinder
Cpa|evm.model.tig00021332.4 tig00021319_g20263.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021373.1 tig00000042_g15521.t1 No description available 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 571 587
IPR001878 Znf_CCHC 552 568
No external refs found!