Aliases : 33187240
Description : Ribosomal protein S8 [Interproscan].
Gene families : OG_01_0003009 (OrthoFinder) Phylogenetic Tree(s): OG0003009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dusal.0068s00005.1 | |
Cluster | HCCA: Cluster_109 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000158.110 | tig00000158_g10212.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | OrthoFinder | |
Cre05.g234637 | 30782975 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | OrthoFinder | |
Cz14g19140.t1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.11 | OrthoFinder | |
EOD16196 | No alias | Ribosomal protein S8 [Ensembl]. | 0.02 | OrthoFinder | |
EOD40032 | No alias | Ribosomal protein S8 [Ensembl]. | 0.11 | OrthoFinder | |
OT_01G02380.1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.08 | OrthoFinder | |
PTI_26G00870.1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.14 | OrthoFinder | |
Sro60_g034790.1 | Contig797.g8956 | 40S ribosomal protein S15a | 0.16 | OrthoFinder | |
TP10G03670.1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.13 | OrthoFinder | |
XM_002507541.1 | MICPUN_107532, 107532 | Ribosomal protein S8 [Interproscan]. | 0.05 | OrthoFinder | |
lcl|BLLF01000519.1_cds_GFH12596.1_7073 | HaLaN_08309, GFH12596 | 40S ribosomal protein S15a | 0.05 | OrthoFinder | |
lcl|LHPG02000004.1_cds_PRW58777.1_7006 | PRW58777 | 40S ribosomal S15a-1 | 0.11 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8495085.1_3615 | KAA8495085 | 40S ribosomal protein S15a | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Enrichment |
BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Enrichment |
BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
CC | GO:0009507 | chloroplast | IEP | Enrichment |
CC | GO:0009536 | plastid | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Enrichment |
BP | GO:0046434 | organophosphate catabolic process | IEP | Enrichment |
MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
BP | GO:0052646 | alditol phosphate metabolic process | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 7 | 130 |
No external refs found! |