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  5. Cpa|evm.model.tig00020710.86

Cpa|evm.model.tig00020710.86 (tig00020710_g13343.t1)


Aliases : tig00020710_g13343.t1

No description available


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020710.86
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000459.51 tig00000459_g1113.t1 No description available 0.03 OrthoFinder
Cre12.g483500 30792128 No description available 0.02 OrthoFinder
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.02 OrthoFinder
Cz02g20010.t1 No alias Vacuolar protein sorting-associated protein 62 [Interproscan]. 0.03 OrthoFinder
OT_03G05620.1 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
OT_15G01640.1 No alias Vacuolar protein sorting-associated protein 13, second... 0.02 OrthoFinder
XM_002506972.1 MICPUN_54783, 54783 Vacuolar protein sorting-associated protein 13, second... 0.02 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13477.1_7954 HaLaN_09370, GFH13477 Vacuolar protein sorting-associated protein 13,... 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44988.1_1843 PRW44988 Vacuolar sorting-associated 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 22 78
IPR031645 VPS13_C 2350 2467
IPR031646 VPS13_N2 154 400
No external refs found!