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  5. Dusal.0029s00008.1

Dusal.0029s00008.1 (33203764)


Aliases : 33203764

Description : Ubiquitin conjugation factor E4, core [Interproscan].


Gene families : OG_01_0000550 (OrthoFinder) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0029s00008.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
PTI_19G02640.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.03 OrthoFinder
Sro160_g072110.1 Contig2985.g23707 (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O 0.02 OrthoFinder
Sro85_g045500.1 Contig4580.g34227 (E3-independent) E2 ubiquitin-conjugating enzyme 0.01 OrthoFinder
XM_002504290.1 MICPUN_84687, 84687 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW55936.1_10033 PRW55936 Baculoviral IAP repeat-containing 6-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR019474 Ub_conjug_fac_E4_core 21 526
No external refs found!