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  5. Cpa|evm.model.tig00020710.49

Cpa|evm.model.tig00020710.49 (tig00020710_g13291.t1)


Aliases : tig00020710_g13291.t1

Description : Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii


Gene families : OG_01_0004290 (OrthoFinder) Phylogenetic Tree(s): OG0004290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020710.49
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020660.10 tig00020660_g12507.t1 No description available 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
CC GO:0000313 organellar ribosome IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008409 5'-3' exonuclease activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1061 1090
IPR001680 WD40_repeat 1349 1384
IPR001680 WD40_repeat 1307 1342
IPR001680 WD40_repeat 1139 1174
IPR001680 WD40_repeat 1181 1216
IPR001680 WD40_repeat 1264 1300
IPR001680 WD40_repeat 1097 1132
IPR001680 WD40_repeat 1391 1426
IPR001680 WD40_repeat 1223 1258
IPR000157 TIR_dom 337 427
IPR001646 5peptide_repeat 1020 1051
No external refs found!