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  5. SymbC1.scaffold9997.3

SymbC1.scaffold9997.3 (9997.3)


Aliases : 9997.3

Description : UBX domain; SEP domain [Interproscan].


Gene families : OG_01_0006937 (OrthoFinder) Phylogenetic Tree(s): OG0006937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9997.3
Cluster HCCA: Cluster_93


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
InterPro domains Description Start Stop
IPR001012 UBX_dom 377 456
IPR012989 SEP_domain 224 284
No external refs found!