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  5. SymbC1.scaffold986.6

SymbC1.scaffold986.6 (986.6)


Aliases : 986.6

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0002425 (OrthoFinder) Phylogenetic Tree(s): OG0002425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold986.6
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Dusal.0670s00007.1 33198285 WD40 repeat [Interproscan]. 0.02 OrthoFinder
EOD09058 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003059324.1 MicpuC2_17773, 17773 WD40 repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005788 endoplasmic reticulum lumen IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008193 tRNA guanylyltransferase activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 288 322
IPR001680 WD40_repeat 186 220
No external refs found!