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  5. SymbC1.scaffold98.9

SymbC1.scaffold98.9 (98.9)


Aliases : 98.9

Description : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain [Interproscan].


Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold98.9
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000361.56 tig00000361_g24404.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000984.21 tig00000984_g5996.t1 No description available 0.02 OrthoFinder
Cre12.g559400 30792375, PDE12 No description available 0.01 OrthoFinder
Dusal.0560s00010.1 33197836 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
SymbC1.scaffold3471.4 3471.4 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.04 OrthoFinder
TP01G07090.1 No alias GAF domain; 3'5'-cyclic nucleotide phosphodiesterase,... 0.01 OrthoFinder
lcl|BLLF01000175.1_cds_GFH08655.1_3132 HaLaN_03648, GFH08655 3'5'-cyclic nucleotide phosphodiesterase 0.02 OrthoFinder
lcl|BLLF01000224.1_cds_GFH09305.1_3782 HaLaN_04415, GFH09305 3'5'-cyclic nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001240.1_cds_GFH18038.1_12515 HaLaN_14774, GFH18038 Phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01005160.1_cds_GFH30817.1_25294 HaLaN_29739, GFH30817 Phosphodiesterase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002073 PDEase_catalytic_dom 553 806
No external refs found!